PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0006s0680.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 279aa    MW: 31767.9 Da    PI: 5.2112
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0006s0680.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1609.2e-50101381129
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                             lppGfrF P+deelv++yL kk++++++    ++ e+d++++ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat sgyWkatg
  SapurV1A.0006s0680.1.p  10 LPPGFRFYPSDEELVCHYLYKKITNEEVLK-GTLVEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGFRTNRATISGYWKATG 95 
                             79************************9655.78***************88888999******************************* PP

                     NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                             kd++vl+   +e+vg++ktLvfyk+rap+g kt W+mhe+rle
  SapurV1A.0006s0680.1.p  96 KDRTVLDPtIREVVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138
                             *******966778***************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-598156IPR003441NAC domain
PROSITE profilePS5100556.99210156IPR003441NAC domain
PfamPF023653.6E-2711137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KITNEEVLKG TLVEIDLHTC EPWQLPEVAK  60
LNATEWYFFS FRDRKYATGF RTNRATISGY WKATGKDRTV LDPTIREVVG MRKTLVFYKN  120
RAPNGIKTGW IMHEFRLETP HMPPKEDWVL CRVFHKSKAE ESTKFMFEST INSGSTVDLT  180
ESPLNPDRQT LPCGYQQMTS LSSTLPHQDQ TSLLNLLQLS QDRNADPMDT DASSKAADEY  240
GFLWDCMGLE GNSLGDGVVA SNLEDLRFEI DHNSMVFL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-47916116170NO APICAL MERISTEM PROTEIN
1ut4_B7e-47916116170NO APICAL MERISTEM PROTEIN
1ut7_A7e-47916116170NO APICAL MERISTEM PROTEIN
1ut7_B7e-47916116170NO APICAL MERISTEM PROTEIN
3swm_A8e-47916119173NAC domain-containing protein 19
3swm_B8e-47916119173NAC domain-containing protein 19
3swm_C8e-47916119173NAC domain-containing protein 19
3swm_D8e-47916119173NAC domain-containing protein 19
3swp_A8e-47916119173NAC domain-containing protein 19
3swp_B8e-47916119173NAC domain-containing protein 19
3swp_C8e-47916119173NAC domain-containing protein 19
3swp_D8e-47916119173NAC domain-containing protein 19
4dul_A7e-47916116170NAC domain-containing protein 19
4dul_B7e-47916116170NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011028825.11e-178PREDICTED: NAC domain-containing protein 21/22-like
SwissprotQ84TE69e-64NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLB9H8N91e-166B9H8N9_POPTR; Uncharacterized protein
STRINGPOPTR_0002s03830.11e-133(Populus trichocarpa)
STRINGGLYMA13G18620.21e-133(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF43813359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.14e-93NAC domain containing protein 74